General programme

GENERAL PROGRAM

Call for abstracts
We welcome the submission of abstracts on a broad range of topics.  We encourage all researchers to submit an abstract to showcase their work and the majority of speakers will be selected from the abstracts.

Programme at glance

Nordic MSP 2025 – Monday 1. September
12:00 Registrations open
13:40 Opening of Nordic MSP2025
Steen Pontoppidan, Allan Stensballe, Ole Nørregaard Jensen
14:00 Opening plenary lecture 1
Ron Heeren (Maastricht University, Netherlands):
Mass spectrometry in Spatial Biology: Imaging across the omics

Chair: Ole Nørregaard Jensen
14:40 Exhibition & coffee
METABOLOMICS
Chair: Nina Sipari
FUNCTIONAL PROTEOMICS
Chair: Allan Stensballe
15:10 Tuulia Hyötyläinen (University of Örebro, Sweden):
From Exposure to Effect: Omics-Based Insights into Endocrine Disruptors and Metabolic Health
Jesper V. Olsen (University of Copenhagen, Denmark):
Deep human proteome profiling with very high throughput
15:35 Katja B P Elgstøen (Oslo University Hospital, Norway):
Global metabolomics in a clinical setting
Lotta Happonen (Lund University, Sweden):
Structural and functional characterization of host-pathogen interactions
15:55 Nikola Micic (University of Copenhagen, Denmark):
Challenges in sample preparation of different plant tissues for MALDI-MSI
Salla Keskitalo (University of Helsinki, Finland):
Automated MagNet Enrichment Unlocks Deep and Cost-Effective LC-MS Plasma Proteomics
16:15 Roosa-Maria Liimatainen (University of Jyväskylä, Finland):
Untargeted analysis and recovery of pharmaceutically significant phytochemicals from Blueberry leaves
Helle Bogetofte (University of Southern Denmark):
Pathways to Parkinson’s Disease: using Proteomics/PTMomics to understand disease development in patient iPSC-derived neurons
16:35 End of session End of session
16:45 Plenary 2
Roman Zubarev (Karolinska Institute, Sweden):
Chemical proteomics springs eternal

Chair: Ole Nørregaard Jensen
17:15 Poster pitch – flash talks
Chair: Allan Stensballe
17:40 Poster session & Exhibition
19:00 Opening reception (Tapas and Wine)
22:00 END of DAY 1
Nordic MSP 2025 – Tuesday 2. September
08:50 Plenary 3
Sarah Cianferani (University of Strasbourg, France):
A journey into structural mass spectrometry methods: from biotherapeutics to structural biology

Chair: Ole Nørregaard Jensen
FORENSICS
Chair: Steen Pontoppidan
STRUCTURAL PROTEOMICS
Chair: Thomas J.D. Jørgensen
09:25 Kim Frisch (Aarhus University, Denmark):
CSI Meets MSI: Decoding Fingermarks with Mass Spectrometry Imaging
Jens S. Andersen (University of Southern Denmark, Denmark):
In-cell protein proximity labeling and structural proteomics identifies novel subunits of the TTLL1 tubulin polyglutamylase complex and reveals a structure-function model of the complex
09:50 Hans Önnerud (Swedish Defence Research Agency, Sweden):
Submerged Crime Scenes: Analysis of Post-Blast Explosive Traces and Forensic Requirements
Guðrún Rútsdóttir (University of Iceland):
Probing Protein Dynamics with Stable Isotope Labeling and Crosslinking Mass Spectrometry
10:10 Frederik Skovbo (Aarhus University, Denmark):
TraceAge: A Machine Learning Approach to Estimating Blood Sample Time-since-Deposition
Jingjing Xu (University of Southern Denmark, Denmark):
Neuroretina Protein Networks Involved in Bird Magnetoreception and Navigation
10:30 Exhibition, Posters & coffee
ENVIRONMENT
Chair: Tuulia Hyötyläinen
MS DATA SCIENCE
Chair: Sven Kjelström
11:00 Alex Dickens (University of Turku, Finland):
PFAS and child brain development
Guro F. Giskeødegård (NTNU, Norway):
Multiomics analysis to reveal the molecular lifespan of cancer
11:25 Pius Kairigo (University of Jyväskylä, Finland):
Untargeted profiling of organic valuables from cabbage stem using UHPLC-Orbitrap-MS and GC-MS; A circular economy approach
Veit Schwämmle (University of Southern Denmark, Denmark):
OmicsQ: A User-Friendly Platform for Interactive Quantitative Omics Data Analysis
11:45 Frants R. Lauritsen (University of Southern Denmark):
Simultaneous MIMS and UV absorption for online kinetic investigations of toxic disinfection byproduct formation during disinfection of drinking water
Lukas Käll (Royal Institute of Technology, Sweden):
De Novo Sequencing of MS2s and Cryo-EM Maps
12:05 Jawameer Hama (Aarhus University, Denmark):
Leveraging Metabolomics to Enhance Defence in Cereal–Legume Co-Cropping
Ayla Schröder (Technical University of Munich, Germany):
Leveraging Insights on Experimental Heterogeneity for Charge State Prediction Generalisation Using a Transformer-based Model
12:25 Lunch, Posters & Exhibition
13:30 Plenary 4
Matthias Mann (Max Planck Institute, Germany):
Fifty Years Forward: From Peptide Sequencing to Spatial Proteomics at Single-Cell Resolution

Chair: Ole Nørregaard Jensen
14:00 Plenary 5
Mathias Wilhelm (Technical University of Munich, Germany):
Prosit-PTM: Zero-Shot Deep Learning Enables Confident Detection and Localization of Unseen Post-Translational Modifications
14:25 Poster pitch – flash talks
Chair: Allan Stensballe
14:45 Exhibition, Posters & coffee
CLINICAL / PHARMA
Chair: Ottar Rolfsson
Posttranslational modifications of proteins
Chair: Margrét Þorsteinsdóttir
15:15 Trine Grønhaug Halvorsen (University of Oslo, Norway):
Smart samplers: Next-generation sampling for LC-MS-based bioanalysis of proteins
Martin R. Larsen (University of Southern Denmark, Denmark):
New Strategy for Identification of Various Lipid Modified PTMs from Complex Peptide Solutions
15:35 Christian Janfelt (University of Copenhagen, Denmark):
New possibilities in drug development with targeted DESI mass spectrometry imaging
Chien-Yun Lee (TU Munich):
Proteome-wide mechanistic analysis of substrate specificity in human protein arginine deiminases
15:55 Allan Stensballe (Aalborg University, Denmark):
Liquid Biomarkers Across Ethnicity, Geography and Age – An hPOP substudy
Jonas Nilsson (University of Gothenburg):
Glycoproteomic Characterization of Chondroitin Sulfate-Glycopeptides of Endogenously Cleaved Aggrecan
16:15 Christian Madsen (Novo Nordisk A/S):
Decoding the Heart Failure Peptidome
Ileana Leon (Ferring Pharmaceuticals, Denmark):
Insights into the fragmentation behavior of disulfide-bridged cyclic peptides by ETD/HCD-MS
16:35 Johan Palmfeldt (Aarhus University, Denmark):
Diabetic Polyneuropathy Patients Exhibit an Altered Skeletal Muscle Proteome Phenotype
Katrin Stuber (University of Copenhagen, Denmark):
Proteomics of Neuroinflammatory Signalling: Illuminating Cellular Mechanisms Driving Neurodegenerative Diseases
17:00 Workshop: Females in Mass Spectrometry
18:45 Exhibition with bubbles
19:30 Gala dinner
01:00 END of DAY 2
Nordic MSP 2025 – Wednesday 3. September
09:00 Plenary 6
Dimitris Papanastasiou (Fasmatech, Greece):
Advances in hardware design and function of the timsOmni platform

Chair: Steen Pontoppidan
09:30 Iris Purma (University of Turku, Finland):
Single-Cell Multi-Omics Identifies Growth Signaling and Survival Mechanisms Underlying Resistance in BRAF-Mutant Melanoma
09:50 Ottar Rolfsson (University of Iceland, Iceland):
The Healing Catch: Biochemical Insights into Fish Skin–Mediated Burn Healing
10:10 Ole Nørregaard Jensen (University of Southern Denmark, Denmark):
Ion mobility spectrometry for top-down proteoform analysis
10:30 Exhibition & coffee
11:00 Plenary 7
Steen Brønsted Nielsen (Aarhus University, Denmark):
Seeing Ions Shine

Chair: Thomas J.D. Jørgensen
11:25 Matej Oresic (University of Turku, Finland):
Chemical exposures and microbiome derived bile acids during early life: insights into the progression to islet autoimmunity
11:45 Luise Ørsted Scharff Brandt (University of Copenhagen, Denmark):
Engaging the public in mass spectrometry to rewrite history
12:05 Lunch, Posters & Exhibition
13:15 Award ceremony
Chair: Guro F. Giskeødegård
13:30 Plenary 8
Stephan Rauschenbach (University of Oxford, United Kingdom):
Atomic resolution molecular imaging based on soft-landing electrospray ion beam deposition

Chair: Allan Stensballe
14:00 Elina Kalenius (University of Jyväskylä, Finland):
Structural chemistry of noncovalent complexes in nanocontainers and their chemoselective properties studied by ion mobility mass spectrometry
14:20 Exhibition & coffee
14:50 Jörn Dengjel (University of Fribourg, Switzerland):
Selective protein degradation by autophagy
15:10 Plenary 9
Klaus Dreisewerd (University of Münster, Germany):
MALDI-2 and t-MALDI-2 Mass Spectrometry Imaging: Molecular Insights into Tissues and Cell Cultures at the Micrometer Scale
15:35 Closing of conference
Steen Pontoppidan, Allan Stensballe, Ole Nørregaard Jensen
15:45–16:30 Farewell drink

Contact information

Name: Steen Pontoppidan

Mail: sp@evosep.com

Phone +45 4040 4501

Address:

Hours

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